CovVax Navigator
Data type(s) to plot:
Antibody titres
Flow cytometry
Bulk BCR repertoire
Select features to plot:
Serum IgM titre
Serum IgG titre
Saliva IgG titre
Serum IgA titre
Saliva IgA titre
Normalised per-cell marker expression
Proportion of plasmablast in whole blood
Proportion of plasma cell in whole blood
Proportion of S1+ in B cells
Proportion of S1+IgA+ in B cells
Proportion of S1+IgG1+ in B cells
Proportion of S1+IgG2+ in B cells
Proportion of S1+IgG3+ in B cells
CD21 MFI in whole blood
BAFF-R MFI in B cells
TACI MFI in B cells
Proportion of B-cell subsets
Proportion of fine-grained B-cell clusters
Show only data specific to S+?
Cell types to show
Flow cytometry marker to show
VDJ gene usage
Mean CDRH3 length (amino acid sequence)
Mean CDRH3 hydrophobicity (Kidera factor 4)
Clonal diversity (1 - Gini index) for clones of size >10
Clonal diversity (1 - Gini index) for clones of size 1 - 5
Clonal diversity (1 - Gini index) for clones of size 5 - 10
Proportion of unmutated clonotypes
Distribution of IgG/A subtypes
Mean V-gene identity to germline
Repertoire subsets to show
Repertoire genes to show
Plot these features in a separate panel:
Show trends for individual donors (thin lines)
Use log10 scale for y-axis:
Primary figure panel
Secondary figure panel
Adjust the scale of the secondary y-axis: